PSI Metrics

Summary Statistics for the PSI-2 Program

Summary of Measures of Success for Experimental Structure Determination and Modeling Leverage as Described in the Goals and Milestones Document


Distinct Structures: Structures with less than 98% sequence identity to an existing structure at the time of PDB deposition

Novel Structures: Structures with less than 30% sequence identity to an existing structure at the time of PDB deposition


Updated March 01, 2010


I.1.A Number of Novel Experimental PSI-2 Structures 1848
I.1.B Number of Distinct Experimental PSI-2 Structures with Nonredundant Sequences 2795
I.1.D Total Number of Experimental PSI-2 Structures 3161
I.1.E Numbers of Experimentally Determined Distinct Residues 635617
Numbers of Experimentally Determined Novel Residues 415064
I.2.B Number of Experimental Structures from Biomedical Theme Target Lists 1115
I.2.C Number of Experimental Structures from Community Outreach Target Lists 371
I.2.J Number of Experimental Structures of Human Proteins 114
I.2.K Number of Experimental Structures of Eukaryotic Proteins 294
I.2.M Number of Experimental Structures of Membrane Proteins 43
I.2.N Number of Experimental Structures Determined at the Atomic Level using X-ray Crystallography 2848
Number of Experimental Structures Determined at the Atomic Level using NMR Methods 313

Updated March 1, 2010


I.1.C Number of BIG Domain Families for which PSI-2 provides the first Experimental Structure Representative 437
Number of MEGA Modeling Families for which PSI-2 provides the first Experimental Structure Representative 562
Number of PFAM Families for which PSI-2 provides the first Experimental Structure Representative 519
Number of Experimentally Determined Distinct BIG Family Structures 731
Numbers of Experimentally Determined Distinct MEGA Modeling Family Structures 723
Numbers of Experimentally Determined Distinct PFAM Family Structures 2337
I.1.E Numbers of Experimentally Determined Distinct BIG Family Residues 156646
Numbers of Experimentally Determined Distinct MEGA Modeling Family Residues 178420
Numbers of Experimentally Determined Distinct PFAM Family Residues 541206

Updated March 1, 2010

Modeling leverage caculations are provided by Dr.Lukasz Jaroszewski affiliated withJCSG


I.3.A Total Modeling Leverage 1272145
I.3.B Novel Modeling Leverage 231200