PSI Metrics

Summary Statistics for the PSI-2 Program

Summary of Measures of Success for Experimental Structure Determination and Modeling Leverage as Described in the Goals and Milestones Document


Distinct Structures: Structures with less than 98% sequence identity to an existing structure at the time of PDB deposition

Novel Structures: Structures with less than 30% sequence identity to an existing structure at the time of PDB deposition

Updated February 01, 2010


I.1.A Number of Novel Experimental PSI-2 Structures 1816
I.1.B Number of Distinct Experimental PSI-2 Structures with Nonredundant Sequences 2728
I.1.D Total Number of Experimental PSI-2 Structures 3094
I.1.E Numbers of Experimentally Determined Distinct Residues 618156
Numbers of Experimentally Determined Novel Residues 405557
I.2.B Number of Experimental Structures from Biomedical Theme Target Lists 1098
I.2.C Number of Experimental Structures from Community Outreach Target Lists 362
I.2.J Number of Experimental Structures of Human Proteins 111
I.2.K Number of Experimental Structures of Eukaryotic Proteins 290
I.2.M Number of Experimental Structures of Membrane Proteins 39
I.2.N Number of Experimental Structures Determined at the Atomic Level using X-ray Crystallography 2790
Number of Experimental Structures Determined at the Atomic Level using NMR Methods 304

Updated February 1, 2010


I.1.C Number of BIG Domain Families for which PSI-2 provides the first Experimental Structure Representative 428
Number of MEGA Modeling Families for which PSI-2 provides the first Experimental Structure Representative 577
Number of PFAM Families for which PSI-2 provides the first Experimental Structure Representative 509
Number of Experimentally Determined Distinct BIG Family Structures 710
Numbers of Experimentally Determined Distinct MEGA Modeling Family Structures 763
Numbers of Experimentally Determined Distinct PFAM Family Structures 2280
I.1.E Numbers of Experimentally Determined Distinct BIG Family Residues 151250
Numbers of Experimentally Determined Distinct MEGA Modeling Family Residues 194124
Numbers of Experimentally Determined Distinct PFAM Family Residues 526816

Updated December 5, 2009

Modeling leverage caculations are provided by Dr.Lukasz Jaroszewski affiliated withJCSG


I.3.A Total Modeling Leverage 1158007
I.3.B Novel Modeling Leverage 223603