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Statistics Summary Report for MSGP Center

                         Last updated: Jul 2 2008



Target Status Statistics

Total number of targets deposited by MSGP to TargetDB: 325      View MSGP Target List

Table 1: Status Statistics for MSGP

Status Total Number of Targets(%) Relative to "Cloned" Targets(%) Relative to "Expressed" Targets(%) Relative to "Purified" Targets(%) Relative to "Crystallized" Targets
Cloned279100.0---
Expressed17562.7100.0--
Soluble9132.652.0--
Purified5921.133.7100.0-
Crystallized3813.621.764.4100.0
Diffraction-quality Crystals165.79.127.142.1
Diffraction145.08.023.736.8
NMR Assigned00.00.00.0-
HSQC00.00.00.0-
Crystal Structure82.94.613.621.1
NMR Structure00.00.00.0-
In PDB100.00.00.00
Work Stopped4----
Test Target0----
Other0----

Last updated: Jul 2 2008

Table 2: Status Statistics for MSGP by Organism

Organism Total Number1 Work Stopped Cloned Expressed Purified Crystallized Crystal Structure NMR Structure In PDB2
Total Viruses22020910000
Bacteria30342591665838800
Total Prokaryotes30342591665838800
Total32542791755938800

Last updated: Jul 2 2008

Note 1:   Total counts in this table may differ from total number of targets. If targtet is a hybrid complex
(for example:a complex of human and mouse polypeptides) it is counted in different organism classifications.

Note 2:   Number of targets with status "in PDB". A target may reference several PDB IDs (example: structure of the same polypeptides with different ligands).
Multiple targets in TargetDB may identify the same PDB structure when a stucture is a result of collaboration between different centers and each center includes
the target on its target list.
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Sequence Redundancy Statistics

Table 3: Sequence Redundancy Statistics for MSGP by Experimental Status

Sequence Identity(%)Novel Targets
Status:
Selected
Novel Targets
Status:
Cloned
Novel Targets
Status:
Expressed
Novel Targets
Status:
Purified
Novel Targets
Status:
Crystallized
Novel Targets
Status:
Crystal Structure
Novel Targets
Status:
in PDB
<100324279175593880
<90322277175593880
<70321276175593880
<50310268174593880
<30226214146543580
Last updated: 08-04-08
Sequence redundancy is calculated by clustering analysis using BLASTClust program with similarity threshold set to percent of sequence identity.   Please view detailed explanation of sequence redundancy calculations and BLASTClust threshold settings.  Sequence redundancy calculations are based on comparison to all protein sequences in TargetDB which are in the same experimental status category and at least 20 amino acids long
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