Statistics Summary Report for YSG Center

Last updated: Mar 11 2010

Target Status Statistics
- Table 1: Status Statistics for YSG
- Table 2: Status Statistics for YSG by Organisms
Sequence Redundancy Statistics
- Table 3: Sequence Redundancy Statistics for YSG by Experimental Status

Target Status Statistics

Total number of targets deposited by YSG to TargetDB: 270

View YSG Target List

Table 1: Status Statistics for YSG

Status	Total Number of Targets	(%) Relative to "Cloned" Targets	(%) Relative to "Expressed" Targets	(%) Relative to "Purified" Targets	(%) Relative to "Crystallized" Targets
Cloned	245	100.0	-	-	-
Expressed	204	83.3	100.0	-	-
Soluble	121	49.4	59.3	-	-
Purified	76	31.0	37.3	100.0	-
Crystallized	8	3.3	3.9	10.5	100.0
Diffraction-quality Crystals	1	0.4	0.5	1.3	12.5
Diffraction	0	0.0	0.0	0.0	0.0
NMR Assigned	0	0.0	0.0	0.0	-
HSQC	0	0.0	0.0	0.0	-
Crystal Structure	11	4.5	5.4	14.5	137.5
NMR Structure	0	0.0	0.0	0.0	-
In PDB1	0	0.0	0.0	0.0	0
Work Stopped	19	-	-	-	-
Test Target	0	-	-	-	-
Other	0	-	-	-	-

Last updated: Mar 11 2010

Table 2: Status Statistics for YSG by Organism

These statistics are derived from mapping of target sequences to GenBank using >=98% sequence identity cut off

Organism	Total Number1	Work Stopped	Cloned	Expressed	Purified	Crystallized	Crystal Structure	NMR Structure	In PDB2
Bacteria	1	0	1	1	0	0	0	0	0
Prokaryota	1	0	1	1	0	0	0	0	0
Yeast	270	19	245	204	76	8	11	0	0
Eukaryota	270	19	245	204	76	8	11	0	0

Last updated: Mar 11 2010

Note 1: Total counts in this table may differ from total number of targets and structures. A target is counted in different organism specifications if:
- a target is mapped to different organisms
- a targtet is a hybrid complex (for example:a complex of human and mouse polypeptides)

Sequence Redundancy Statistics

Table 3: Sequence Redundancy Statistics for YSG by Experimental Status

Sequence Identity(%)	Novel Targets Status: Selected	Novel Targets Status: Cloned	Novel Targets Status: Expressed	Novel Targets Status: Purified	Novel Targets Status: Crystallized	Novel Targets Status: Crystal Structure	Novel Targets Status: in PDB
<100	270	245	204	76	8	11	0
<90	270	245	204	76	8	11	0
<70	269	244	203	76	8	11	0
<50	265	242	201	76	8	11	0
<30	251	236	198	74	8	11	0

Last updated: 10-03-08

Sequence redundancy is calculated by clustering analysis using BLASTClust program with similarity threshold set to percent of sequence identity. Please view detailed explanation of sequence redundancy calculations and BLASTClust threshold settings. Sequence redundancy calculations are based on comparison to all protein sequences in TargetDB which are in the same experimental status category and at least 20 amino acids long